i2b2: Informatics for Integrating Biology & the Bedside - A National Center for Biomedical Computing

i2b2 (Informatics for Integrating Biology and the Bedside) is an NIH-funded National Center for Biomedical Computing based at Partners HealthCare System. The i2b2 Center is developing a scalable informatics framework that will enable clinical researchers to use existing clinical data for discovery research and, when combined with IRB-approved genomic data, facilitate the design of targeted therapies for individual patients with diseases having genetic origins. This platform currently enjoys wide international adoption by the CTSA network, academic health centers, and industry.  i2b2 is funded as a cooperative agreement with the National Institutes of Health.

    Current DBPs
        Autoimmune/CV Diseases
        Diabetes/CV Diseases
    Past DBPs
        Airways Diseases
        Type 2 Diabetes Mellitus
        Huntington's Disease
        Major Depressive Disorder
        Rheumatoid Arthritis
      Computational Tools
      NLP Research Data Sets
      NLP Shared Tasks
      Academic Users' Group
      Publication Data



       ***i2b2 Installations Worldwide***


      Tuesday, June 21, 2016

      Agenda, Registration, and Lodging info here.

      *** Precision Medicine 2015 Conference: Patient Driven ***

      Wednesday, June 22, 2015

      Agenda, Registration, and Lodging info here.

      *** i2b2 NLP DATA SET #5 (from 2011 Challenge) ***

      A complete set of annotated and unannotated, deidentified patient discharge summaries from the First, Second (Obesity),Third (Medication) and Fourth Shared Tasks for Challenges in NLP for Clincial Data are now available to the community for research purposes. Check it out at our NLP Data Sets page. Please note you must register AND submit a DUA for access.

      *** i2b2 ROADMAP ***

      Release i2b2-CT = “Clinical-Trial enabled i2b2”

      In the summer of 2015 we are planning on the release of a version of i2b2 which represents a bundle of Community Supported i2b2 Plug-ins and Tools. This version will specifically support the end to end use case for the discovery of a set of patients for a clinical trial. Current plug-ins and features will be enhanced and new features added from the i2b2 community to provide increasingly focused selection capabilities to narrow down to a final, well qualified patient set. The process of advancing the levels of approval by data use agreements and institutional review boards will be supported to allow the recruitment process to proceed with the maximal respect for patient privacy and confidentiality.


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