Source Code for Data Repository (CRC) Cell #
In the chapter titled Install i2b2 Server-Common, you extracted the files from the i2b2 Core Source Code zip file into a directory of your choosing (YOUR_I2B2_SRC_DIR). One of the files extracted was a folder called edu.harvard.i2b2.crc and it is in this folder where the files for the CRC installation reside.
CRC Directory Structure #
The main directory for the CRC Cell is edu.harvard.i2b2.crc and as stated earlier this directory resides in YOUR_I2B2_SRC_DIR. During this installation of the CRC cell we will be editing a number of files that reside within the CRC directory. These files and their location are outlined below:
Main CRC Directory:
YOUR_I2B2_SRC_DIRi2b2edu.harvard.i2b2.crc
|
File Name |
Description |
|---|---|
|
build.properties |
Contains properties needed during the building of the CRC Cell. |
Directory for CRC and CRCLoader Properties:
YOUR_I2B2_SRC_DIRi2b2edu.harvard.i2b2.crcetcspring
|
File Name |
Description |
|---|---|
|
crc_application_directory.properties |
Define the location for your application properties. |
|
edu.harvard.i2b2.crc.loader.properties |
Define the properties for the PM and FR cells for the CRCLoader. |
|
CRCLoaderApplicationContext.xml |
Define several properties for database sources and lookup table for the CRCLoader. |
|
crc.properties |
Define the properties for the CRC cell, CRC service account, and various parameters that are used by the CRC when running queries on the server. |
Directory for Data Source Configuration:
YOUR_I2B2_SRC_DIRi2b2edu.harvard.i2b2.crcetcjboss
|
File Name |
Description |
|---|---|
|
crc-ds.xml |
Configure the JBoss Data source for the CRC cell. |
